Strand-seq of NSI: male lymphoblastoid cell line - SRA

SRX25191859: Strand-seq of NSI: male lymphoblastoid cell line
1 ILLUMINA (NextSeq 500) run: 78,771 spots, 11.9M bases, 4.9Mb downloads

Design: Strand-seq of single Nomascus siki cell, cultured in 100uM BrdU for 24h

Submitted by: University of Bari

Study: Nomascus siki strand-seq data

Genome analysis of a Nomascus siki cell line through single-cell DNA template strand sequencing

Sample: Nomascus siki strand-seq data cell i559

Library:

Name: NSI_i559

Instrument: NextSeq 500

Strategy: OTHER

Source: GENOMIC SINGLE CELL

Selection: MNase

Layout: PAIRED

Runs: 1 run, 78,771 spots, 11.9M bases, 4.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR29688633	78,771	11.9M	4.9Mb	2024-07-03

Supplemental Content

Homo sapiens interferon alpha induced transcriptional activator (ISGF-3) mRNA se...
Homo sapiens interferon alpha induced transcriptional activator (ISGF-3) mRNA sequence
gi|186566|gb|M97934.1|HUMISGF

Nucleotide
TPA_inf: prion protein [Nomascus siki]
TPA_inf: prion protein [Nomascus siki]
gi|2713752541|tpg|DBA45302.1|

Protein
Homo sapiens crystallin, lambda 1, mRNA (cDNA clone IMAGE:40115998), partial cds
Homo sapiens crystallin, lambda 1, mRNA (cDNA clone IMAGE:40115998), partial cds
gi|111185580|gb|BC119660.1|

Nucleotide
Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana]
gi|15218287|ref|NP_173025.1|

Protein
Stage II Sinonasal Cancer AJCC v6 and v7
Stage II Sinonasal Cancer AJCC v6 and v7

MedGen

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SRA